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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11509495_11509780_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11509495 - 11509780

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTGCCC

5'SS Class:

major

3'SS Sequence:

CCCGTGGCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CATCCCCTGACA

Flanking Amino Acid:

AEHPAQAVHPGVQRLLPKAA

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.1

50.5

40.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

54.8

0.11

1.1

48.9

39.3

Minor 5ss

25.6

-2.8

3.2

34.2

41.5

Minor BPS

0.18

1.7

66.06

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021629

11505957 - 11514574

8618

ENSAPLT00000017172

11505957 - 11511817

5861