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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11540699_11540818_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11540699 - 11540818

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGGCAG

5'SS Class:

major

3'SS Sequence:

TGTTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGTGGAT

U12 Branch Point Sequence:

ATGTGCTGGATC

Flanking Amino Acid:

LVPADVQQQEVEPLQQPQPV

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.3

52.6

45.8

Major BPS

47.6

-0.1

1.5

46.5

Major PPT

83.5

0.75

0.8

77.6

31.1

Minor 5ss

25.1

-2.9

3.2

29.3

43.4

Minor BPS

48.1

-0.1

1.9

60.17

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038398

11539575 - 11562618

23044