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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11565864_11566857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11565864 - 11566857

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

GTTTTCTTGACC

Flanking Amino Acid:

HCHYCNGTGMETINKGPFVM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

78.7

0.65

74.2

40.2

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

0.89

1.1

82.24

31.3

Associated Gene:

Gene:

DNAJA3

Ensembl Gene ID:

ENSAPLG00000014210

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042871

11565619 - 11573491

7873

ENSAPLT00000014828

11565619 - 11573491

7873