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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11567850_11568758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11567850 - 11568758

Intron Length:

909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTATC

5'SS Class:

major

3'SS Sequence:

GCCTGCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

CTTTTTGCAACT

Flanking Amino Acid:

GKKEIFITFRVQKSSVFRRN

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

76.4

39.6

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

73.8

0.54

0.9

37.1

Minor 5ss

38.8

-1.3

45.8

42.6

Minor BPS

49.4

0.04

2.2

74.97

42.5

Associated Gene:

Gene:

DNAJA3

Ensembl Gene ID:

ENSAPLG00000014210

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042871

11565619 - 11573491

7873

ENSAPLT00000014828

11565619 - 11573491

7873