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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11569443_11570208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11569443 - 11570208

Intron Length:

766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

CTTTGACCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

CTGTCTTTGACC

Flanking Amino Acid:

HYIHIKIKVPQRLTDRQRAL

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

74.1

0.6

66.7

39.9

Major PPT

77.7

0.62

0.9

70.5

35.2

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

71.5

0.66

1.2

73.02

38.9

Associated Gene:

Gene:

DNAJA3

Ensembl Gene ID:

ENSAPLG00000014210

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042871

11565619 - 11573491

7873

ENSAPLT00000014828

11565619 - 11573491

7873