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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11588809_11589522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11588809 - 11589522

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTTCCCCTGACA

Flanking Amino Acid:

SVKDCQIQKLSLAENQISNK

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

41.8

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

78.3

0.64

77.1

37.1

Minor 5ss

33.2

-1.9

3.4

48.6

47.1

Minor BPS

61.3

0.35

1.7

73.14

38.3

Associated Gene:

Gene:

NLRC3

Ensembl Gene ID:

ENSAPLG00000007304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032835

11578767 - 11595903

17137

ENSAPLT00000031577

11584749 - 11594751

10003

ENSAPLT00000022844

11578767 - 11594751

15985

ENSAPLT00000007591

11584749 - 11595903

11155