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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11590856_11591490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11590856 - 11591490

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

CCTCCTGTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

CTGCTGGTGACG

Flanking Amino Acid:

LKRNCSLKELMLSSNSVGDN

Intron Amino Acid Position:

812

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

32.8

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

70.2

0.46

0.8

68.3

31.9

Minor 5ss

28.7

-2.4

3.3

38.7

39.6

Minor BPS

37.6

-1.1

2.5

42.54

43.3

Associated Gene:

Gene:

NLRC3

Ensembl Gene ID:

ENSAPLG00000007304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007591

11584749 - 11595903

11155

ENSAPLT00000032835

11578767 - 11595903

17137

ENSAPLT00000031577

11584749 - 11594751

10003

ENSAPLT00000022844

11578767 - 11594751

15985

ENSAPLT00000022719

11578767 - 11595903

17137