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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11591882_11593199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11591882 - 11593199

Intron Length:

1318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAG

U12 Branch Point Sequence:

CAGCCTTCAGCT

Flanking Amino Acid:

LCSNKGLVNLNLQWNFIQAN

Intron Amino Acid Position:

944

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

51.1

0.03

1.6

43.2

Major PPT

91.5

0.93

0.6

87.3

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

46.2

-0.2

1.8

58.79

44.3

Associated Gene:

Gene:

NLRC3

Ensembl Gene ID:

ENSAPLG00000007304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022844

11578767 - 11594751

15985