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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11594210_11594660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11594210 - 11594660

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAA

U12 Branch Point Sequence:

CAAGCCTGAACT

Flanking Amino Acid:

LKGNHGLTYVNLQGNRIGQS

Intron Amino Acid Position:

1064

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

52.9

0.07

1.4

64.5

42.8

Major PPT

78.2

0.63

0.7

75.9

26.1

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

59.8

0.38

1.6

71.12

45.1

Associated Gene:

Gene:

NLRC3

Ensembl Gene ID:

ENSAPLG00000007304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007591

11584749 - 11595903

11155

ENSAPLT00000032835

11578767 - 11595903

17137

ENSAPLT00000031577

11584749 - 11594751

10003

ENSAPLT00000022844

11578767 - 11594751

15985

ENSAPLT00000022719

11578767 - 11595903

17137