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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11599170_11602610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11599170 - 11602610

Intron Length:

3441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

TGGTCATGGACT

Flanking Amino Acid:

TMQGGDTEEEEESGDSEIDL

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

79.9

0.67

0.8

73.7

31.3

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

54.6

0.23

1.8

74.26

42.2

Associated Gene:

Gene:

CLUAP1

Ensembl Gene ID:

ENSAPLG00000007325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044912

11598958 - 11669540

70583