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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11599743_11602610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11599743 - 11602610

Intron Length:

2868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGGTTCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TGGTTCTCCAAG

Flanking Amino Acid:

TMQGGDTEEEGRSAPAQPGK

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

62.3

0.28

1.1

59.8

40.8

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

43.4

-0.6

2.1

49.15

44.4

Associated Gene:

Gene:

CLUAP1

Ensembl Gene ID:

ENSAPLG00000007325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034082

11598958 - 11669540

70583

ENSAPLT00000007630

11598958 - 11669540

70583