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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11602667_11611949_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11602667 - 11611949

Intron Length:

9283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTTCA

5'SS Class:

major

3'SS Sequence:

CTTTGCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TTTATGGTGACT

Flanking Amino Acid:

RHMAMEALMQGRTGTRIVGT

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

68.8

38.9

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

83.2

0.75

0.8

77.2

31.6

Minor 5ss

-0.5

2.8

59.8

44.6

Minor BPS

45.5

-0.2

2.6

75.05

42.1

Associated Gene:

Gene:

CLUAP1

Ensembl Gene ID:

ENSAPLG00000007325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044912

11598958 - 11669540

70583

ENSAPLT00000034082

11598958 - 11669540

70583

ENSAPLT00000007630

11598958 - 11669540

70583