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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11612058_11621409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11612058 - 11621409

Intron Length:

9352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAACC

Flanking Amino Acid:

EEEQHLLKSGNNDNSDADIQ

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

69.9

41.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.9

0.58

71.1

43.4

Minor 5ss

33.8

-1.8

3.2

40.5

39.9

Minor BPS

75.2

0.77

1.3

81.25

33.5

Associated Gene:

Gene:

CLUAP1

Ensembl Gene ID:

ENSAPLG00000007325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044912

11598958 - 11669540

70583

ENSAPLT00000034082

11598958 - 11669540

70583

ENSAPLT00000007630

11598958 - 11669540

70583