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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11643489_11644679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11643489 - 11644679

Intron Length:

1191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAAGATT

5'SS Class:

major

3'SS Sequence:

TTGTTGTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TTTCTCTGAGTA

Flanking Amino Acid:

QKRLQTLQSVRPAFMDEYEK

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

76.2

39.1

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

82.6

0.73

0.9

77.3

Minor 5ss

-1.3

3.5

57.9

46.5

Minor BPS

54.2

0.13

1.7

69.52

36.7

Associated Gene:

Gene:

CLUAP1

Ensembl Gene ID:

ENSAPLG00000007325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044912

11598958 - 11669540

70583

ENSAPLT00000034082

11598958 - 11669540

70583

ENSAPLT00000007630

11598958 - 11669540

70583