Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_11697570_11698694_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11697570 - 11698694

Intron Length:

1125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTCGTGCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

TTTTCGTGCACA

Flanking Amino Acid:

GIGGKKQSRYEQVPPQGYVT

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

78.6

29.9

Major BPS

0.55

71.8

31.4

Major PPT

67.5

0.39

61.2

39.4

Minor 5ss

31.8

-2.1

37.3

41.2

Minor BPS

49.6

-0

2.6

76.11

41.2

Associated Gene:

Gene:

ANKS3

Ensembl Gene ID:

ENSAPLG00000007413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043529

11689352 - 11702022

12671

ENSAPLT00000007733

11692287 - 11702022

9736