Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_11701278_11701600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11701278 - 11701600

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

TTCTGTTATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TTTTCTGTTATT

Flanking Amino Acid:

QYEVVQECIQRGDLDLNKRN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

64.7

46.6

Major BPS

0.47

1.2

61.1

45.5

Major PPT

78.2

0.63

0.9

77.6

35.8

Minor 5ss

32.1

-2

3.1

40.5

45.4

Minor BPS

55.4

0.25

2.3

83.31

38.3

Associated Gene:

Gene:

ANKS3

Ensembl Gene ID:

ENSAPLG00000007413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043529

11689352 - 11702022

12671

ENSAPLT00000007733

11692287 - 11702022

9736