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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11701777_11701911_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11701777 - 11701911

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAA

U12 Branch Point Sequence:

CCAGCTTAAAGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.5

37.3

Major BPS

0.25

1.3

63.9

40.2

Major PPT

74.4

0.55

72.8

42.2

Minor 5ss

31.7

-2.1

3.6

47.8

47.9

Minor BPS

44.4

-0.3

55.24

47.3

Associated Gene:

Gene:

ANKS3

Ensembl Gene ID:

ENSAPLG00000007413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043529

11689352 - 11702022

12671

ENSAPLT00000007733

11692287 - 11702022

9736