Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_11713827_11714685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11713827 - 11714685

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTCCT

5'SS Class:

major

3'SS Sequence:

TTTCTGTACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CTTTCTGTACTT

Flanking Amino Acid:

ISSQEEQENKKDVAFMSSLP

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

41.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

74.2

0.55

0.9

73.8

35.8

Minor 5ss

37.2

-1.4

3.3

39.6

Minor BPS

49.6

0.05

2.2

74.65

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038546

11705930 - 11805643

99714