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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11715744_11718511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11715744 - 11718511

Intron Length:

2768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

TATTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATTC

Flanking Amino Acid:

VTIKDQTERRMRNCSGKSLL

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

30.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.7

0.76

0.8

77.9

30.4

Minor 5ss

44.9

-0.5

3.1

64.4

40.2

Minor BPS

61.4

0.34

1.5

70.06

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038546

11705930 - 11805643

99714