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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11718878_11720481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11718878 - 11720481

Intron Length:

1604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCGCAC

5'SS Class:

major

3'SS Sequence:

GTATATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

ATGTGTATATTT

Flanking Amino Acid:

ESPLPATELPRTEESKIELS

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.2

56.6

42.5

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

80.5

0.69

0.9

77.3

41.3

Minor 5ss

42.7

-0.8

3.2

58.6

46.2

Minor BPS

43.5

-0.4

2.1

62.52

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038546

11705930 - 11805643

99714