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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11776155_11777698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11776155 - 11777698

Intron Length:

1544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGCCAT

5'SS Class:

major

3'SS Sequence:

CTTCCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

CTTCCTTTTACA

Flanking Amino Acid:

LFFTEKDFVTNAEYRPATKY

Intron Amino Acid Position:

1308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

64.3

41.6

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

88.4

0.86

0.7

25.4

Minor 5ss

41.4

-1

3.2

58.2

41.5

Minor BPS

63.1

0.41

1.6

72.64

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038546

11705930 - 11805643

99714