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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11781777_11787073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11781777 - 11787073

Intron Length:

5297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTAC

5'SS Class:

major

3'SS Sequence:

TATTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTATTATAATC

Flanking Amino Acid:

LGLLSSEVKQDPAVLEAHCT

Intron Amino Acid Position:

1404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

72.2

33.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

90.8

0.92

0.7

27.5

Minor 5ss

42.9

-0.8

2.4

52.8

44.4

Minor BPS

58.2

0.24

1.6

71.33

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038546

11705930 - 11805643

99714