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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11797588_11801554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11797588 - 11801554

Intron Length:

3967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTACCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTTTCTTTACCC

Flanking Amino Acid:

AVICFDSLLDSVCWQKQSLL

Intron Amino Acid Position:

1641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

0.6

65.6

41.1

Major PPT

78.6

0.64

0.8

70.4

35.3

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

76.8

0.82

1.5

85.93

32.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038546

11705930 - 11805643

99714