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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11850146_11852622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11850146 - 11852622

Intron Length:

2477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

GTTGCATTCACG

Flanking Amino Acid:

YHDFFTNILQLIQSPVTTPL

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

78.3

0.7

32.1

Major PPT

90.8

0.92

0.6

88.8

20.5

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

48.6

-0.2

2.2

61.23

46.2

Associated Gene:

Gene:

XPO6

Ensembl Gene ID:

ENSAPLG00000007480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021432

11845267 - 11883749

38483

ENSAPLT00000007799

11845228 - 11883749

38522