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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11853261_11857917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11853261 - 11857917

Intron Length:

4657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

ATCACCTTGATT

Flanking Amino Acid:

PPPSPTSGESGDLLSSLLQS

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

74.1

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

83.9

0.76

0.6

78.2

30.7

Minor 5ss

32.7

-2

3.1

37.9

40.9

Minor BPS

0.68

1.3

78.03

38.5

Associated Gene:

Gene:

XPO6

Ensembl Gene ID:

ENSAPLG00000007480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021432

11845267 - 11883749

38483

ENSAPLT00000007799

11845228 - 11883749

38522