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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11866142_11868320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11866142 - 11868320

Intron Length:

2179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TCATGCTCATTT

Flanking Amino Acid:

LLPTHAFSTLFPVLQDNLEV

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

76.9

31.6

Major BPS

71.6

0.54

33.1

Major PPT

88.2

0.86

0.6

81.7

30.3

Minor 5ss

37.9

-1.4

2.7

47.4

36.1

Minor BPS

45.9

-0.2

2.1

64.66

46.1

Associated Gene:

Gene:

XPO6

Ensembl Gene ID:

ENSAPLG00000007480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021432

11845267 - 11883749

38483

ENSAPLT00000007799

11845228 - 11883749

38522