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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11869760_11870543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11869760 - 11870543

Intron Length:

784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTATG

5'SS Class:

strong_major

3'SS Sequence:

TATTCACTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TTTGTTTTACCA

Flanking Amino Acid:

RFNDALTVVERLVKVTLYGS

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

82.3

0.8

83.6

25.8

Major PPT

81.2

0.7

0.8

74.6

34.8

Minor 5ss

-1.4

3.1

50.1

46.4

Minor BPS

0.34

1.7

73.92

38.7

Associated Gene:

Gene:

XPO6

Ensembl Gene ID:

ENSAPLG00000007480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021432

11845267 - 11883749

38483

ENSAPLT00000007799

11845228 - 11883749

38522