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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11872877_11873531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11872877 - 11873531

Intron Length:

655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCACTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

GCAGCCTGACCA

Flanking Amino Acid:

EAITPLISSKVQEKLLLSAC

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

51.1

0.03

1.2

39.9

Major PPT

75.1

0.56

0.8

68.2

31.8

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

46.8

-0.2

1.8

53.69

44.4

Associated Gene:

Gene:

XPO6

Ensembl Gene ID:

ENSAPLG00000007480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021432

11845267 - 11883749

38483

ENSAPLT00000007799

11845228 - 11883749

38522