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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11896260_11910041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11896260 - 11910041

Intron Length:

13782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

CTCGTCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

TTCCTGGTAACG

Flanking Amino Acid:

QFATAYGAEQVKDLTKYLDP

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

63.1

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

79.2

0.66

0.8

72.7

32.1

Minor 5ss

25.6

-2.8

30.2

Minor BPS

43.3

-0.6

2.6

55.65

45.9

Associated Gene:

Gene:

RAB11FIP3

Ensembl Gene ID:

ENSAPLG00000007552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032349

11895768 - 11955689

59922

ENSAPLT00000007841

11895768 - 11955689

59922