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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11921600_11934386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11921600 - 11934386

Intron Length:

12787

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTTAC

U12 Branch Point Sequence:

TGTCTTGTAACA

Flanking Amino Acid:

DEFDDFVTFEANEVTDSAYM

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.7

1.15

0.7

86.9

30.2

Major BPS

60.1

0.25

51.3

35.1

Major PPT

73.7

0.53

69.2

40.7

Minor 5ss

25.7

-2.8

3.6

34.1

41.4

Minor BPS

0.09

68.82

37.6

Associated Gene:

Gene:

RAB11FIP3

Ensembl Gene ID:

ENSAPLG00000007552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032349

11895768 - 11955689

59922

ENSAPLT00000007841

11895768 - 11955689

59922