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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11934575_11937342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11934575 - 11937342

Intron Length:

2768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTCAGTGGC

5'SS Class:

major

3'SS Sequence:

TCTGTCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTAACAT

U12 Branch Point Sequence:

CACCCCGTAACA

Flanking Amino Acid:

FTDPIEEPEHGSHPHDLPLG

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.3

64.2

41.5

Major BPS

53.2

0.08

1.3

63.4

42.8

Major PPT

75.6

0.58

0.8

31.7

Minor 5ss

-2.5

2.9

27.2

36.3

Minor BPS

51.1

0.03

2.1

61.72

44.2

Associated Gene:

Gene:

RAB11FIP3

Ensembl Gene ID:

ENSAPLG00000007552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032349

11895768 - 11955689

59922

ENSAPLT00000007841

11895768 - 11955689

59922