Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_11937517_11941044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11937517 - 11941044

Intron Length:

3528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTC

5'SS Class:

major

3'SS Sequence:

GTGATTTCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TCCTGTTGAAAT

Flanking Amino Acid:

SFNSSSFLSPSTNPLAAKLH

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.7

40.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

71.1

0.48

0.9

62.6

44.1

Minor 5ss

35.4

-1.7

3.4

50.6

45.9

Minor BPS

47.7

-0

65.38

45.3

Associated Gene:

Gene:

RAB11FIP3

Ensembl Gene ID:

ENSAPLG00000007552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032349

11895768 - 11955689

59922