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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11944265_11946707_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11944265 - 11946707

Intron Length:

2443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTCG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTC

U12 Branch Point Sequence:

TTCTCTGCTACA

Flanking Amino Acid:

NKRLSSKKVARQLHQTSALA

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

40.1

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

81.7

0.71

0.8

76.1

32.6

Minor 5ss

44.2

-0.6

2.8

56.7

47.6

Minor BPS

44.5

-0.4

2.4

43.4

Associated Gene:

Gene:

RAB11FIP3

Ensembl Gene ID:

ENSAPLG00000007552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032349

11895768 - 11955689

59922

ENSAPLT00000007841

11895768 - 11955689

59922