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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11948324_11949474_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11948324 - 11949474

Intron Length:

1151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CCACGTTTAATA

Flanking Amino Acid:

LKQENLQLVHRANALEEQLK

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

77.4

0.62

0.7

72.3

25.8

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

48.2

-0.1

1.8

52.68

40.3

Associated Gene:

Gene:

RAB11FIP3

Ensembl Gene ID:

ENSAPLG00000007552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032349

11895768 - 11955689

59922

ENSAPLT00000007841

11895768 - 11955689

59922