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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11950880_11952469_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11950880 - 11952469

Intron Length:

1590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGACG

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

TCTGCCTCACGG

Flanking Amino Acid:

LKANIERLEEEKQKLLDEIE

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

72.1

39.1

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

69.5

0.44

61.8

39.9

Minor 5ss

27.1

-2.6

2.9

31.3

42.6

Minor BPS

43.7

-0.6

2.2

50.75

49.3

Associated Gene:

Gene:

RAB11FIP3

Ensembl Gene ID:

ENSAPLG00000007552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007841

11895768 - 11955689

59922

ENSAPLT00000032349

11895768 - 11955689

59922