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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11954074_11954760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11954074 - 11954760

Intron Length:

687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACCAC

U12 Branch Point Sequence:

CGGCGGTGACCA

Flanking Amino Acid:

AEISSVSRDELMEAIQKQEE

Intron Amino Acid Position:

645

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

46.2

-0.2

1.4

52.5

42.7

Major PPT

74.6

0.55

0.7

68.5

25.1

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

32.9

-1.3

2.3

37.79

40.7

Associated Gene:

Gene:

RAB11FIP3

Ensembl Gene ID:

ENSAPLG00000007552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032349

11895768 - 11955689

59922

ENSAPLT00000007841

11895768 - 11955689

59922