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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11972323_11972524_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11972323 - 11972524

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCACTGCGG

5'SS Class:

weak_major

3'SS Sequence:

GCTCTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAG

U12 Branch Point Sequence:

CCCTCGGGGACC

Flanking Amino Acid:

TGETRGRGRPCSFLPKFSIY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.4

0.15

1.4

42.9

44.1

Major BPS

44.5

-0.3

1.6

55.8

41.7

Major PPT

72.3

0.5

0.8

65.6

30.3

Minor 5ss

19.3

-3.5

29.5

43.2

Minor BPS

37.3

-1

2.5

45.42

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002439

11970925 - 11973785

2861