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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11973075_11973144_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11973075 - 11973144

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

CGGTGTCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGTGTCACACAG

Flanking Amino Acid:

QTRVEQFVHKVIRDILLIGH

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

66.3

0.4

1.1

41.8

Major PPT

60.9

0.25

53.6

40.7

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

34.5

-1.3

1.9

35.04

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002439

11970925 - 11973785

2861