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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11973209_11973519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11973209 - 11973519

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

GTGTGCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCGAG

U12 Branch Point Sequence:

CCGTGCTGGAGG

Flanking Amino Acid:

QAFTWVDEWCGMTMEEVRRY

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

39.1

-0.6

1.6

33.2

Major PPT

63.6

0.31

1.1

58.4

43.1

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

39.6

-0.9

2.1

38.18

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002439

11970925 - 11973785

2861