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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11974961_11975274_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11974961 - 11975274

Intron Length:

314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TACGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

ACTCACTGATAC

Flanking Amino Acid:

RPDLVVGFHPGFHACPDLMA

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

71.2

0.53

37.5

Major PPT

69.1

0.43

0.9

62.3

34.3

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

42.2

-0.6

1.8

49.93

39.6

Associated Gene:

Gene:

MSS51

Ensembl Gene ID:

ENSAPLG00000002712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023230

11974386 - 11976865

2480

ENSAPLT00000002737

11974386 - 11976865

2480