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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11976427_11976683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11976427 - 11976683

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GGGCTCCCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

CCCTACTCACCC

Flanking Amino Acid:

KLNMKSYEDYKSAMDGRKRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.2

34.5

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

67.9

0.4

62.7

39.7

Minor 5ss

28.3

-2.5

3.1

31.3

36.6

Minor BPS

44.5

-0.4

50.87

Associated Gene:

Gene:

MSS51

Ensembl Gene ID:

ENSAPLG00000002712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002737

11974386 - 11976865

2480

ENSAPLT00000023230

11974386 - 11976865

2480