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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11981690_11982709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11981690 - 11982709

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATTGGCTCAATT

Flanking Amino Acid:

PSESLHPEAKCGLEVTVRTE

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.1

36.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

74.9

0.56

0.8

68.2

32.1

Minor 5ss

38.1

-1.3

3.1

49.4

46.8

Minor BPS

51.6

0.13

2.1

74.33

Associated Gene:

Gene:

CFAP70

Ensembl Gene ID:

ENSAPLG00000002851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026780

11976009 - 11999645

23637

ENSAPLT00000017411

11977538 - 11999645

22108

ENSAPLT00000002879

11976009 - 11999645

23637

ENSAPLT00000047259

11976009 - 11999645

23637