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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12005054_12005596_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12005054 - 12005596

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGCCAC

U12 Branch Point Sequence:

ACCAGGGTGACC

Flanking Amino Acid:

FVVHLDVATQENQVVRISFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.6

38.4

Major BPS

44.3

-0.3

1.2

47.9

36.7

Major PPT

0.65

0.9

76.4

37.6

Minor 5ss

25.5

-2.8

3.1

30.6

43.3

Minor BPS

33.1

-1.3

2.6

39.7

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003052

12004741 - 12023396

18656