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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12005680_12005843_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12005680 - 12005843

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGCGCAGC

5'SS Class:

weak_major

3'SS Sequence:

GGCGTGGATGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGTGGAT

U12 Branch Point Sequence:

GTGGCGTGGATG

Flanking Amino Acid:

STATWLQFPFVVLARSPSCN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.4

0.08

1.2

47.2

43.3

Major BPS

47.6

-0.1

1.5

46.5

Major PPT

54.9

0.11

1.1

46.2

45.1

Minor 5ss

35.2

-1.7

3.2

43.1

44.4

Minor BPS

40.3

-0.9

2.2

43.21

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003052

12004741 - 12023396

18656