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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12006160_12007137_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12006160 - 12007137

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

CCTTGGAGAATT

Flanking Amino Acid:

VCTSDLVFDPGVTFSEARQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

74.4

0.55

0.8

66.1

35.9

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

-0.8

2.5

56.93

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032682

12006033 - 12024072

18040