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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12006160_12007164_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12006160 - 12007164

Intron Length:

1005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GAGGCCCGACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

TAGGTGTGACTT

Flanking Amino Acid:

VCTSDLVFDPANLAGHGVSP

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

44.3

-0.3

1.1

31.5

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

38.4

-0.8

2.2

52.63

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003052

12004741 - 12023396

18656