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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12013488_12014545_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12013488 - 12014545

Intron Length:

1058

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGGAGGGG

5'SS Class:

weak_major

3'SS Sequence:

TTTGGGGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAA

U12 Branch Point Sequence:

CGGTGTACAATG

Flanking Amino Acid:

LLPSQQQDQQGPGIAINSIS

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.1

1.2

46.9

38.6

Major BPS

58.4

0.21

1.2

39.8

Major PPT

73.8

0.54

1.1

69.2

46.1

Minor 5ss

10.4

-4.6

3.6

28.6

Minor BPS

37.6

-1

36.51

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003052

12004741 - 12023396

18656