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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12016040_12016535_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12016040 - 12016535

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CGCTTTTCAATT

Flanking Amino Acid:

LAASDLLVEHKQHRTVITGL

Intron Amino Acid Position:

631

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

79.3

0.66

0.8

31.9

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

51.7

0.13

1.5

63.62

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032682

12006033 - 12024072

18040

ENSAPLT00000003052

12004741 - 12023396

18656