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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12016667_12017060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12016667 - 12017060

Intron Length:

394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGGCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTCTTCTTATCC

Flanking Amino Acid:

VPKSHVLRVLGNVVARDAGS

Intron Amino Acid Position:

675

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.7

44.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

66.4

0.37

61.9

39.9

Minor 5ss

43.4

-0.7

3.2

57.4

46.8

Minor BPS

62.8

0.38

1.6

69.18

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032682

12006033 - 12024072

18040

ENSAPLT00000003052

12004741 - 12023396

18656