Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_12017192_12017315_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12017192 - 12017315

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCCGGC

5'SS Class:

major

3'SS Sequence:

CCTCGTTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTCAGTAGCT

Flanking Amino Acid:

TVMEASSLDELLRVDISILE

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.3

53.3

45.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

76.9

0.61

0.8

70.8

33.5

Minor 5ss

41.2

-1

3.5

59.3

45.4

Minor BPS

52.9

0.17

2.4

85.33

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032682

12006033 - 12024072

18040

ENSAPLT00000003052

12004741 - 12023396

18656